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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880953.1_cds_XP_016437615.1_33357
CDS Infomation

[gene=LOC107763641] [db_xref=GeneID:107763641] [protein=growth-regulating factor 1-like] [protein_id=XP_016437615.1] [location=complement(join(42470..43280,43566..43920,44918..45142,45772..46213))] [gbkey=CDS]
Sequence

ATGGATTTTGGTGGGGTGATGACAATGGAAACCAAACAAGAATCTGCTAATAACATTTCA
AAAACAGTCAACTCTCCAGCTGAGACTAACAACTCCTCAAAGATCACTAATGGATCTGGG
CAGCAACTGAAACAAGAGAGATCTGGGCCTTGTGATGACACTAATTGTAGGTCATCTAAA
GTCCAAAGAGCAGCAGCAGATGACTTCTCTGCCCTTTGTAAGCAGATGCCCCAACAGCAA
GGTCCTACTACTCCCACTTTGTTCATGAGATCTGGTTCCCCAAATAATGGACGTGGTCAC
TCCACTATGCTCAGTTTTTCATCTCCTAAATCTGAAGAATTAATCCCTTTTCTTTCTACT
AATAATGCTTCTGCGCAGGACTCATCTAAGAGTCTTGCTTTCCCATTGTTTGACTCTGGA
TCCCACTATAGCAGAGCTTCAGCTTATGCCTCTGGAGGTTCAAACGAAAGCACGCGTGGC
GCTTTTGTTGCGAGGTTCAGAGGTCTATTTACTCCATCTCAGTGGATGGAATTGGAACAT
CAGGCTTTGATCTATAAGCACCTTGTGGCAAATGTACCAGTCCCTCACCAGTTGCTCATT
CCTCTTAAGAAGTCTCTCAACCCTTATGCATTTTCTGGCTTGTCCTCTGGATCTTATGCC
TCCAATTGGGGATGGGGTACTTTCCATCTTGGTTTCACTGGCAACACCGATCCAGAGCCT
GGTAGGTGTCGTCGAACAGATGGAAAGAAATGGCGGTGCTCACGAGAAGCTGTCCCTGAT
CAGAAGTACTGTGAAAGGCACATAAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAA
GGTCAGAATGGCCATGCTGTCTCTGGATCCACCACTTCAAAGGTGGCATCAGTCGCACCC
TCCTCATCAGCGACGGTGATATCCAGCAGCGGCACATCCAACAGCCTGGGTGCTGTTCAG
CACCAGTTCAATAGCTTGCAGCCCAGTGCTGCCAATCCTTCCACGGACCAGCTTGTCAAC
AGAATGCAAGATCATAAAGGTGTCTCTATGATATCTCCAACAATTGGTTTGAAGCCCAAG
GCCTCGGCTATTTCAATTCAGAAGCAACATAATGGATTTGAACTATCCTCGCTGTCAGAG
TTTGGACTTGTCTCGTCAGATTCTCTTCTTAATCCTTCGCAAAGAAGTTCCTTTGTGAAT
CCTAAGAATTCCAATGCTTTCATAGATTTCAATGACCAAGAACAAAGTGAACAACATCCA
GTTCACCATTTCATTGATGGCTGGACCAAGGAACAGTCTTCACGTGCCTCTGCATCTTGG
CCCGATGAACTCAAATCAGACTGGACCCAACTGTCCATGGCCATTCCCATGGCTGCCTCA
GATTTCTCATCATCATCGAATTCTCCTCGTCAAGAGAAACTCACTCTTTCTCCCTTAAGG
TTATCTCGTGATTTTGACCCGATTCAAATGGGCTTGGGAGTAACAAATAGCCACGGTGAA
CCTATGCAAAAGACAGCTAATTGGTTACCAGTATCCTGGGAAAATGCCCTTGGTGGTCCA
CTAGGTGAGGTCCTGAATAGTACTGCAGGTAACGCAGGAGATGCCAAGAACTCTTCAGCT
CTGAACCTGGCAACAGAGATGTGGGATAGCAGCCCTCCATTTGGATCATCTCCTACGGGC
GTCCTGCAGAAGTCAACCTTTGTTTCGCTCTCAAACAGCAGCTCAGGAGGTAGTCCCCGA
GCTGACAGCAAGAAGGTTCATGAGGGTGCTGGCATGTGCGATGAGGTGATCGGTTCAACT
CTGGCGAGTTCATTGTGTATTCCCTCGATGTAA

Peptide Sequence

PEP ID

XP_016437615.1
PEP Infomation

PREDICTED: growth-regulating factor 1-like [Nicotiana tabacum]
Sequence

MDFGGVMTMETKQESANNISKTVNSPAETNNSSKITNGSGQQLKQERSGPCDDTNCRSSK
VQRAAADDFSALCKQMPQQQGPTTPTLFMRSGSPNNGRGHSTMLSFSSPKSEELIPFLST
NNASAQDSSKSLAFPLFDSGSHYSRASAYASGGSNESTRGAFVARFRGLFTPSQWMELEH
QALIYKHLVANVPVPHQLLIPLKKSLNPYAFSGLSSGSYASNWGWGTFHLGFTGNTDPEP
GRCRRTDGKKWRCSREAVPDQKYCERHINRGRHRSRKPVEGQNGHAVSGSTTSKVASVAP
SSSATVISSSGTSNSLGAVQHQFNSLQPSAANPSTDQLVNRMQDHKGVSMISPTIGLKPK
ASAISIQKQHNGFELSSLSEFGLVSSDSLLNPSQRSSFVNPKNSNAFIDFNDQEQSEQHP
VHHFIDGWTKEQSSRASASWPDELKSDWTQLSMAIPMAASDFSSSSNSPRQEKLTLSPLR
LSRDFDPIQMGLGVTNSHGEPMQKTANWLPVSWENALGGPLGEVLNSTAGNAGDAKNSSA
LNLATEMWDSSPPFGSSPTGVLQKSTFVSLSNSSSGGSPRADSKKVHEGAGMCDEVIGST
LASSLCIPSM

Transcript Sequence

Gene sequence data has not been registered.